Table 1 Core functions of the PathMe Python package
From: PathMe: merging and exploring mechanistic pathway knowledge
Function | Description |
|---|---|
Download | Downloads the pathway files from the original source |
BEL | Converts the original pathway files to BEL |
Summarize | Presents global statistics of the total number of nodes and edges converted to BEL |
Statistics | Creates an excel sheet that summarizes the results of the BEL conversion for every pathway |