Table 1 Real datasets characteristics
From: metaSPARSim: a 16S rRNA gene sequencing count data simulator
Characteristic | Animal gut | Raw milk cheese | HMP |
|---|---|---|---|
Samples | 110 | 118 | 40 |
Replicates | 5 | 2-3 | 5 |
Groups | 22 | 40 | 8 |
Features | 3541 | 3109 | 758 |
Sequencing depth (range) | 88692-832309 | 28536-349754 | 2798-24095 |
Count data sparsity | 78.69% | 97.12% | 81.37% |