An iteration method for identifying yeast essential proteins from heterogeneous network

BMC Bioinformatics

Table 2 Number of essential proteins predicted by RWHN and ten competing methods based on the Gavin dataset

Methods	1%(19)	5%(93)	10%(196)	15%(279)	20%(371)	25%(464)
DC	12	44	80	106	145	182
IC	11	42	79	108	147	189
SC	9	36	77	109	146	179
BC	10	40	76	103	134	163
CC	9	38	77	113	141	175
NC	11	51	123	170	213	259
PeC	15	69	142	193	238	285
CoEWC	16	69	136	190	237	275
POEM	17	74	148	199	249	296
ION	17	73	150	207	263	312
RWHN	18	83	169	222	277	330

This table shows the comparison of the number of essential proteins identified by RWHN and ten other competing methods (DC, IC, SC, BC, CC, NC, PeC, CoEWC, POEM and ION) based on the Gavin dataset. The total number of ranked proteins in Gavin dataset is 1855. The digits in brackets denote the number of proteins ranked in each top percentage

ISSN: 1471-2105