Table 3 Linear discriminant analysis (LDA) of 36 plant genome samples
Training label | Genome | Genome Size (M) | Helitron | HM−1 | LDA predicted |
|---|---|---|---|---|---|
Osa japonica | Oryza sativa japonica IRGSP v7_JGI | 380 | 2980 | 7.8421 | Osa japonica |
Osa japonica | Oryza sativa japonica Syngenta | 399 | 3015 | 7.5564 | Osa japonica |
Osa indica | Oryza sativa indica PA64s | 389 | 2863 | 7.3599 | Osa indica |
Osa indica | Oryza sativa indica 93–11 | 431 | 3120 | 7.239 | Osa indica |
Ath | A. thaliana Col-0 | 121 | 665 | 5.4959 | Ath |
Ath | A. thaliana Can-0 | 119.3 | 590 | 4.9455 | Ath |
Ath | A. thaliana Zu-0 | 119.7 | 590 | 4.929 | Ath |
Ath | A. thaliana Po-0 | 120.5 | 593 | 4.9212 | Ath |
Ath | A. thaliana Hi-0 | 120.3 | 592 | 4.921 | Ath |
Ath | A. thaliana Oy-0 | 119.5 | 575 | 4.8117 | Ath |
Ath | A. thaliana Wu-0 | 119.7 | 572 | 4.7786 | Ath |
Ath | A. thaliana Sf-2 | 119.6 | 567 | 4.7408 | Ath |
Ath | A. thaliana Ct-1 | 119.6 | 567 | 4.7408 | Ath |
Ath | A. thaliana Mt-0 | 119.5 | 565 | 4.728 | Ath |
Ath | A. thaliana Edi-0 | 119.8 | 564 | 4.7078 | Ath |
Ath | A. thaliana Tsu-0 | 119.6 | 559 | 4.6739 | Ath |
Ath | A. thaliana Bur-0 | 119.7 | 556 | 4.6449 | Ath |
Ath | A. thaliana Rsch-4 | 119.8 | 554 | 4.6244 | Ath |
Ath | A. thaliana Ler-0 | 119.7 | 552 | 4.6115 | Ath |
Ath | A. thaliana Ws-0 | 119.8 | 547 | 4.5659 | Ath |
Ath | A. thaliana Wil-2 | 119.5 | 543 | 4.5439 | Ath |
Ath | A. thaliana Kn-0 | 119.7 | 542 | 4.528 | Ath |
Tsa | Eutrema salsugineum v1.0 | 246.2 | 1060 | 4.3054 | Tsa |
Tsa | Thellungiella salsuginea v2 | 233.7 | 1032 | 4.4159 | Tsa |
Tpa | Thellungiella parvula v8 | 123.6 | 202 | 1.6343 | Tpa |
Tpa | Schrenkiella parvula | 140 | 223 | 1.5929 | Tpa |
Bol | Brassica oleracea A2 v1.1 | 391 | 5392 | 13.7903 | Bol |
Bol | Brassica oleracea TO1000 v2.1 | 498 | 6979 | 14.0141 | Bol |
Zma | Zm B73 V4.0 | 2134 | 8274 | 3.8765 | Zma |
Zma | Zm CML247 V1.1 | 2197 | 8791 | 3.9996 | Zma |
Zma | Zm EP1 V1.0 | 2455 | 8481 | 3.4542 | Zma |
Zma | Zm F7 V1.0 | 2392 | 8602 | 3.5949 | Zma |
Zma | Zm Mo17 V1.0 | 2182 | 8602 | 3.9412 | Zma |
Zma | Zm W22 V2.0 | 2133 | 8132 | 3.8109 | Zma |
| Â | Denovo_genome_L | 121.1 | 640 | 5.2849 | Ath |
| Â | Denovo_genome_X | 120.2 | 643 | 5.3494 | Ath |
Correct Rate |  |  |  |  | 36/36 = 100% |