Table 2 Descriptive statistics of the pre-processed reads and total count from all samples
From: iMAP: an integrated bioinformatics and visualization pipeline for microbiome data analysis
Statistics | Original_R1 | TrimQ25_R1 | NophiX_R1 | Original_R2 | TrimQ25_R2 | NophiX_R2 |
|---|---|---|---|---|---|---|
Min. | 14 | 14 | 14 | 14 | 14 | 14 |
1st Qu. | 5368 | 5365 | 5365 | 5368 | 5365 | 5365 |
Median | 8001 | 7996 | 7996 | 8001 | 7996 | 7996 |
Mean | 10,096 | 10,089 | 10,088 | 10,096 | 10,089 | 10,088 |
3rd Qu. | 13,636 | 13,630 | 13,630 | 13,636 | 13,630 | 13,630 |
Max. | 40,113 | 40,077 | 40,077 | 40,113 | 40,077 | 40,077 |
Total reads | 3,634,461 | 3,631,940 | 3,631,769 | 3,634,461 | 3,631,940 | 3,631,769 |