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Table 3 List of top three most used assembly programs for Metazoa (Year > =2016)

From: Shared data science infrastructure for genomics data

Kingdom Program Name species Total length Scaffold-count ScaffoldN50 ContigCount ContigN50
Metazoa SOAPdenovo 21 1B ± 0.8B 38 k ± 49 k 7.8 M ± 11 M 86 k ± 66 k 98 k ± 208 k
  AllPaths 48 0.9B ± 0.7B 7.1 k ± 7 k 4.3 M ± 1.4 M 33 k ± 38 k 188 k ± 335 k
  Newbler 7 0.8B ± 0.9B 3.3 k ± 2.2 k 877 k ± 910 k 56 k ± 80 k 75 k ± 60 k