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Table 2 Overhead and per objective function evaluation timings of stochastic algorithms for n=256,000

From: Stochastic Lanczos estimation of genomic variance components for linear mixed-effects models

Method OverheadPer evaluationEvaluation countTotal
BOLT-LMM v2.1 34.6335.834177.95
BOLT-LMM v2.3.2 10.8220.07491.09
L_FOMC_REML 89.872.066102.21
SLDF_REML {with genotype matrix90.221.06999.73
 with precomputed GRM28.951.07938.60
  1. Data reflect trimmed mean wall clock time in minutes over 20 iterations per condition