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Table 4 Comparison of PTPD with state-of-the-art methods on the Neurotoxins dataset

From: PTPD: predicting therapeutic peptides by deep learning and word2vec

Method

Sn(%)

Sp(%)

Acc(%)

MCC

AUC

PTPD

98.00

94.00

96.00

0.92

0.93

q-FP [10]

99.03

98.00

98.40

0.94

1

VirulentPred [18]

96.00

16.00

56.00

-

-

NTX-pred(FNN) [16]

89.65

78.78

84.19

0.69

-

NTX-pred(RNN) [16]

89.12

96.35

92.75

0.86

-

NTX-pred(SVM) [16]

96.32

97.22

97.72

0.94

-

AS [41]

92.00

1.00

96.00

0.92

0.99

2Gram [41]

1.00

90.91

95.00

0.91

1

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BMC Bioinformatics

ISSN: 1471-2105

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