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Table 3 Performance comparison with other methods based on NewMIPS

From: Identifying protein complexes based on an edge weight algorithm and core-attachment structure

Algorithms Recall Precision F-measure MMR CR
BioGRID
MCL 0.2896 0.2011 0.2374 0.0726 0.2995
CFinder 0.5914 0.1960 0.2944 0.2801 3rd 0.4402
Core 0.5609 0.1488 0.2352 0.1437 0.5882
DPClus 0.6951 0.1741 0.2785 0.201 0.5597
CMC 0.8109 1st 0.2731 0.4086 0.3175 2nd 0.4954
COACH 0.7256 0.2581 0.3807 0.2525 0.6322 3rd
SPICi 0.4969 0.3725 0.4258 0.1304 0.4378
ClusterONE 0.5914 0.3130 0.4093 0.1917 0.5311
PEWCC 0.4512 0.5943 2nd 0.5129 3rd 0.1889 0.4119
ProRank+ 0.4817 0.7131 1st 0.5750 2nd 0.241 0.4763
GMFTP 0.7530 3rd 0.2830 0.4114 0.2551 0.5186
DPC 0.6310 0.3050 0.4112 0.2312 0.6332 2nd
EWCA 0.7561 2nd 0.5821 3rd 0.6578 1 st 0.3764 1 st 0.6497 1 st
DIP
MCL 0.4908 0.1783 0.2616 0.1255 0.3271
CFinder 0.5762 0.2408 0.3396 0.2128 0.2403
Core 0.4420 0.1746 0.2504 0.1249 0.3902
DPClus 0.6067 3rd 0.1392 0.2265 0.1626 0.3356
CMC 0.5932 0.4152 0.4885 0.2499 2nd 0.5736 1 st
COACH 0.5731 0.5106 2nd 0.5401 2nd 0.2006 0.3351
SPICi 0.4847 0.2473 0.3275 0.1095 0.3191
ClusterONE 0.4054 0.3020 0.3462 0.1178 0.2417
PEWCC 0.5670 0.4822 0.5212 3rd 0.2297 3rd 0.3280
ProRank+ 0.4085 0.6657 1 st 0.5063 0.1669 0.2444
GMFTP 0.6981 2nd 0.2755 0.3951 0.2228 0.4043 2nd
DPC 0.4908 0.4389 0.4634 0.1717 0.3305
EWCA 0.7012 1 st 0.4990 3rd 0.5830 1 st 0.3094 1 st 0.3982 3rd
  1. NOTE: The highest value in each column is shown in bold