fagin: synteny-based phylostratigraphy and finer classification of young genes

BMC Bioinformatics

Table 1 Genomic statistics for species in the Brassicaceae (top) and Saccharomyces (bottom)

species	nseq	n50 (nt)	size (nt)	prots	Ns
A. thaliana	7	23,459,830	119,667,750	35,386	185,738
A. lyrata	695	24,464,547	206,667,935	32,550	22,960,134
C. rubella	773	15,040,190	133,063,876	28,713	3,314,705
E. salsugineum	638	13,441,892	243,110,105	29,485	4,665,582
B. rapa	40,249	26,286,742	284,129,391	51,005	10,904,295
S. cerevisiae	17	924,431	12.2 M	6008	0
S. paradoxus	832	49,124	11.9 M	5933	0
S. mikatae	1648	20,026	11.5 M	6086	0
S. kudriavzevii	2054	11,253	11.2 M	6529	2127
S. arboricola	35	879,294	11.6 M	3659	224,325
S. eubayanus	24	896,107	11.7 M	5379	121,986
S. uvarum	1098	25,082	11.5 M	5721	0

ISSN: 1471-2105