From: Multiple-level biomedical event trigger recognition with transfer learning
Trigger type | Basic Model A | TL Model C | MLTrigNer Model | ||||||
---|---|---|---|---|---|---|---|---|---|
 | P | R | F1 | P | R | F1 | P | R | F1 |
Cell proliferation | 85.37 | 81.40 | 83.33 | 80.95 | 79.07 | 80.00 | 81.40 | 81.40 | 81.40 |
Development | 66.37 | 76.53 | 71.09 | 76.29 | 75.51 | 75.90 | 78.00 | 79.59 | 78.79 |
Blood vessel develop | 97.33 | 94.19 | 95.74 | 97.98 | 93.87 | 95.88 | 100.0 | 94.52 | 97.18 |
Growth | 96.00 | 85.71 | 90.57 | 90.74 | 87.50 | 89.09 | 92.31 | 85.71 | 88.89 |
Death | 73.68 | 75.68 | 74.67 | 67.39 | 83.78 | 74.70 | 69.57 | 86.49 | 77.11 |
Breakdown | 82.35 | 63.64 | 71.79 | 75.00 | 68.18 | 71.43 | 87.50 | 63.64 | 73.68 |
Remodeling | 71.43 | 50.00 | 58.82 | 55.55 | 50.00 | 52.63 | 85.71 | 66.67 | 75.00 |
Synthesis | 50.00 | 25.00 | 33.33 | 0.0 | 0.0 | 0.0 | 100.0 | 100.0 | 100.0 |
Gene expression | 91.67 | 83.33 | 87.30 | 91.80 | 84.85 | 88.19 | 94.44 | 90.15 | 92.25 |
Transcription | 0.0 | 0.0 | 0.0 | 50.00 | 16.67 | 25.00 | 100.0 | 66.67 | 80.00 |
Protein Catabolism | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 100.0 | 60.00 | 75.00 |
Phosphorylation | 75.00 | 100.0 | 85.71 | 60.00 | 100.0 | 75.00 | 75.00 | 100.0 | 85.71 |
Dephosphorylation | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
Localization | 78.83 | 81.20 | 80.00 | 82.09 | 82.71 | 82.40 | 82.17 | 79.70 | 80.92 |
Binding | 86.96 | 70.18 | 77.67 | 83.02 | 77.19 | 80.00 | 91.49 | 75.43 | 82.69 |
Regulation | 59.80 | 58.93 | 59.37 | 60.27 | 63.77 | 61.97 | 61.71 | 66.18 | 63.87 |
Positive regulation | 80.88 | 81.90 | 81.39 | 84.82 | 81.59 | 83.17 | 84.81 | 85.07 | 84.94 |
Negative regulation | 84.73 | 65.71 | 74.02 | 80.75 | 78.78 | 79.75 | 78.96 | 75.10 | 76.99 |
Planned process | 78.69 | 48.98 | 60.38 | 74.15 | 55.61 | 63.56 | 78.76 | 58.67 | 67.25 |
TOTAL | 81.63 | 74.26 | 77.77 | 81.52 | 77.66 | 79.53 | 83.31 | 79.40 | 81.31 |