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Table 4 SNPs identified for the resistance to tetracycline (TET) by DNP-AAP

From: Antimicrobial resistance genetic factor identification from whole-genome sequence data using deep feature selection

ID RangeIDAAPGenesAnnotationsKnown
 270950.470 intergenic between NGK_1771 and NGK_1772  
 214680.205NGK_1458putative phage associated protein 
[37926,37927]379270.196rpsJ30S ribosomal protein S10
 299600.159NGK_1968IS1016 transposase 
 373000.150NGK_2398methionyl-tRNA formyltransferase 
 400410.131NGK_2557hemoglobin/transferrin/lactoferrin receptor 
    protein 
 214670.121NGK_1458putative phage associated protein 
 97850.120NGK_0668putative phage associated protein 
 97870.120NGK_0668putative phage associated protein 
 187610.119NGK_1227putative HTH-type transcriptional regulator 
    NMB1378 
  1. Annotations are from EnsemblBacteria. The column “ID Range” lists the ranges of SNPs that fall in known AMR-associated genes (only) in our data. ID: ID of Identified SNP
  2. *NGK_1771: transferrin-binding protein A; NGK_1772: TbpB