Table 2 Comparison of E. coli strain similarities across time and spatial location
Draft genome 1 | Draft genome 2 | Total bases aligned | Average percent identity | Total number SNPs |
|---|---|---|---|---|
Assembly A | Assembly C | 4,965,009 | 99.98 | 371 |
Assembly C | Assembly D | 5,050,613 | 99.91 | 3811 |
Bloodstream isolate | Assembly C | 5,056,888 | 99.99 | 182 |
Bloodstream isolate | Assembly D | 5,002,210 | 99.91 | 3742 |
E. coli strain S88 (NCBI) | Assembly C | 4,410,742 | 98.61 | 56,513 |