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Table 2 PLNet2: The number of paths with at least one positive interaction (partial) and with all interactions are positives (complete) among the first 10 and 100 reconstructed paths

From: Integrating protein localization with automated signaling pathway reconstruction

Pathway/Method

First 10 Paths

First 100 Paths

 

Partial

Complete

Partial

Complete

α6β4 Integrin

    

PL

0

0

0

0

LocPL

1

0

9

0

Yen_CC

1

0

4

0

EGFR1

    

PL

0

0

11

3

LocPL

1

0

29

6

Yen_CC

2

0

20

0

IL2

    

PL

0

0

39

8

LocPL

5

0

44

6

Yen_CC

3

1

30

5

Wnt

    

PL

3

0

32

6

LocPL

6

4

13

4

Yen_CC

3

2

5

2