Fig. 2
From: Benchmark datasets of immune receptor-epitope structural complexes
The IEDB JSmol viewer can be used to manually inspect receptor-antigen interactions. The blue colored spheres in the antibody-antigen complex (PDB ID: 1XIW) shown in the figure represent the epitope residues and yellow spheres are paratope residues in direct contact with each other. Individual interacting residues can be selected using the right-side panel