Fig. 4

Plot of exported subgraph. a, Cytoscape allows for the styling of imported networks, and by mapping the node width to the sequence length it is simple to visualise which nodes represent insertions. Nodes can be coloured by which isolates they contain, in this case Beijing isolates were represented by red nodes, H37Rv by blue nodes, and purple nodes represent nodes shared by all isolates. b, For more detail on nodes of interest, a table listing the node and edge attributes is also available