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Table 2 Average Spearman correlation coefficients under 5-fold cross-validation for several network architectures

From: Prediction of sgRNA on-target activity in bacteria by deep learning

Networks

Cas9

eSpCas9

Cas9 (â–³recA)

 

Set 1

Set 2

Set 1

Set 2

Set 1

Set 2

DeepCRISPR

0.5149

0.5139

0.6617

0.6631

0.3108

0.3049

CNN_Lin

0.5217

0.5214

0.6665

0.6685

0.3176

0.3144

DeepCas9

0.5554

0.5517

0.6951

0.6881

0.3400

0.3362

CNN_5layers

0.5817

0.5787

0.7105

0.7063

0.3602

0.3577

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BMC Bioinformatics

ISSN: 1471-2105

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