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Table 1 Comparison of the features within the currently available packages for plotting evolutionary dynamics

From: EvoFreq: visualization of the Evolutionary Frequencies of sequence and model data

 

ggmuller

fishplot

EvoFreq

Frequency data

 

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Size data

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Long format

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Wide format

 

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Smoothing

 

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Uses ggplot

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Animations

  

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Create graphs

  

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Integration with subclonal

   

reconstruction software

 

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  1. EvoFreq is capable of visualizing the evolutionary dynamics from ClonEvol, PhyloWGS, and CALDER
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BMC Bioinformatics

ISSN: 1471-2105

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