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Table 2 Intron accuracy

From: VARUS: sampling complementary RNA reads from the sequence read archive

  Intron#spots# seq.
  snsp[M]runs
Anopheles gambiaeVARUS.8050.2350566
 manual.269.17918.45
BombusVARUS.918.36550357
terrestrismanual.666.62329.13
ChlamydomonasVARUS.687.3750618
reinhardtiimanual.68.26885
CucumisVARUS.96.41450643
sativusmanual.91.262126.67
DrosophilaVARUS.935.35950758
melanogastermanual.896.26458.55
FragariaVARUS.915.47550170
vescamanual.823.32271.97
HymenolepisVARUS.886.2375031
microstomamanual.778.39115.72
MedicagoVARUS.717.38650403
truncatulamanual.723.21214.96
ParasteatodaVARUS.869.4695080
tepidariorummanual.83.35271.96
PrunusVARUS.945.188400266
persicamanual.942.138328.86
SaccharomycesVARUS.864.00450983
cerevisiaemanual.85.00299.85
VerticilliumVARUS.681.2225030
dahliaemanual.662.33681.93
  1. The sensitivity (sn) and specificity (sp) with which VARUS and the manual method find introns in the reference genome annotation. The last two columns shows the number of reads or read pairs (spots) in millions that have been downloaded from SRA and from how many different runs they stem. Better values are typeset in boldface