Skip to main content

Advertisement

Table 2 Assessment of DFIRE and DOPE scoring functions on the principal interaction model and the full interaction model on Decoy Sets

From: Identification of native protein structures captured by principal interactions

Decoy SetDFIREDOPE
CASP10–133DRobotTotal/AverageCASP10–133DRobotTotal/Average
Top154 (56)13 (12)67 (68)75 (74)63 (71)138 (145)
Z-score1.18 (1.18)1.33 (1.20)1.92 (1.19)1.39 (1.37)1.64 (1.90)1.51 (1.63)
RMSD6.95 (6.01)2.02 (1.44)4.48 (3.72)5.55 (5.31)1.28 (0.82)3.41 (3.06)
PC0.56 (0.51)0.80 (0.81)0.68 (0.66)0.54 (0.44)0.81 (0.82)0.67 (0.63)
F.E.1.59 (1.56)3.73 (3.74)2.66 (2.65)1.63 (1.58)3.86 (3.87)2.74 (2.72)
Z-scoreb0.54 (0.47)1.45 (1.65)1.00 (1.06)0.53 (0.46)1.54 (1.77)1.03 (1.11)
PI0.18 ± 0.050.19 ± 0.050.18 ± 0.050.19 ± 0.050.21 ± 0.050.20 ± 0.05
#Target175200375175200375