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Fig. 5 | BMC Bioinformatics

Fig. 5

From: Impact of quality trimming on the efficiency of reads joining and diversity analysis of Illumina paired-end reads in the context of QIIME1 and QIIME2 microbiome analysis frameworks

Fig. 5

(a) The distance of each sample to its gold standard after the principal coordinate analysis using the Jaccard distance for QIIME2 analysis in the simulated (Sim) dataset. (b) Amplicon sequence variant (ASV) assignment error: False positive percentage means the percentage of ASVs that were assigned in the samples but were not originally present in the gold standard. False negative percentage is the percentage of ASVs that were not detected in the samples but were included in the gold standard

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BMC Bioinformatics

ISSN: 1471-2105

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