Table 7 The 9 features and their computation
Features | Abbreviation | Software or Researchers |
|---|---|---|
Interior Contact area | IC | Qcontacts |
Exterior Contact area with other residues | EC | Qcontacts |
Exterior Void area | EV | NACCES, Qcontacts |
Absolute Exterior Solvent Accessible area | AESA | NACCES |
Relative Exterior Solvent Accessible area | RESA | NACCES |
Hydropathy index, version 1 | H1 | Jack Kyte et al. |
Hydropathy index, version 2 | H2 | David Eisenberg |
pKa1: computation | pKa1 | PROPKA3.1 |
pKa2: standard | pKa2 | PROPKA3.1 |