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Table 9 Bacteria-biotope relation candidates (instances) in a sentence after entity blinding

From: Relation extraction between bacteria and biotopes from biomedical texts with attention mechanisms and domain-specific contextual representations

Entity pair

Bacteria-biotope relation candidate after entity binding

(Helicobacter pylori, gastric)

Long-term entity_1 infection and the development of atrophic gastritis and entity_2 cancer in Japan.

(Helicobacter pylori, Japan)

Long-term entity_1 infection and the development of atrophic gastritis and gastric cancer in entity_2.

  1. The bacteria and location mentions are highlighted in bold italics and italics, respectively
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BMC Bioinformatics

ISSN: 1471-2105

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