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Table 8 The performance of different network architectures on the SignalP Eukaryotes dataset

From: SigUNet: signal peptide recognition based on semantic segmentation

ArchitectureMCC (%)FPRTM (%)Recall (%)Precision (%)F1 measure (%)
U-Net-1Da84.16.887.388.587.9
SigUNet-maxb88.65.091.491.391.3
SigUNet90.24.092.193.092.5
  1. aA one-dimensional U-Net that has the same network configuration as Fig. 3, but the input and output layer are modified for protein sequences. bThe max pooling layers in Fig. 4 are replaced with average pooling layers
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BMC Bioinformatics

ISSN: 1471-2105

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