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Table 8 The performance of different network architectures on the SignalP Eukaryotes dataset

From: SigUNet: signal peptide recognition based on semantic segmentation

Architecture MCC (%) FPRTM (%) Recall (%) Precision (%) F1 measure (%)
U-Net-1Da 84.1 6.8 87.3 88.5 87.9
SigUNet-maxb 88.6 5.0 91.4 91.3 91.3
SigUNet 90.2 4.0 92.1 93.0 92.5
  1. aA one-dimensional U-Net that has the same network configuration as Fig. 3, but the input and output layer are modified for protein sequences. bThe max pooling layers in Fig. 4 are replaced with average pooling layers
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BMC Bioinformatics

ISSN: 1471-2105

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