NmSEER V2.0: a prediction tool for 2′-O-methylation sites based on random forest and multi-encoding combination

BMC Bioinformatics

Table 1 AUROC comparison among seven algorithms based on multi-encodings by independent test

Algorithm\Encoding	One-hot	PSNSP	PSDSP	KNF	KSNPF
RF	0.811	0.804	0.850	0.761	0.722
LR	0.761	0.762	0.833	0.761	0.740
GaussianNB	0.756	0.753	0.824	0.729	0.646
Adaboost	0.756	0.765	0.847	0.747	0.704
SVM	0.810	0.747	0.831	0.686	0.730
MLP	0.810	0.777	0.844	0.758	0.759
CNN	0.822	0.771	0.842	0.749	0.653
RF (1:1 training set)	0.801	0.797	0.848	0.763	0.724

ISSN: 1471-2105