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Table 2 The second set of weights of the epigenomic, transcriptomic and proteomic variables extracted by msPLS from the Marfan data

From: Multiset sparse partial least squares path modeling for high dimensional omics data analysis

Methylation markers

Gene expression markers

Cytokine markers

Site

w

Gene code

w

Marker code

w

cg23054189

0.93

AGTR2

-0.59

b NGF 46

0.57

cg18347642

0.93

C2orf43

0.87

CTACK 72

0.52

cg16489610

0.85

CCDC112

0.87

GRO a 61

0.16

cg27013696

0.91

DKFZP434

-0.58

HGF 62

-0.08

cg20457796

0.93

GMCL1

0.88

Hu Eotaxin 43

0.12

cg03181582

0.91

LPO

-0.77

Hu FGF basic 44

0.23

cg10521851

0.9

MAD2L1

0.74

Hu G.CSF 57

-0.57

cg19968840

0.92

MGC4473

-0.81

Hu GM CSF 34

-0.03

cg27648075

0.92

NFAM1

-0.7

Hu IFN g 21

-0.03

cg22891500

0.92

NMI

0.8

Hu Il 10 56

0.17

cg05158197

0.92

PF4

-0.83

Hu IL 12 p70 75

0.43

cg20119106

0.93

PRDM14

-0.71

Hu IL 13 51

0.26

cg02675353

0.91

PSMA8

-0.63

Hu IL 15 73

0.67

cg26991025

0.93

RDM1

0.47

Hu IL 17 76

-0.14

cg20643012

0.92

RNF8

0.69

Hu IL 1b 39

-0.03

  

TTC30A

0.8

Hu IL 1ra 25

-0.03

  

TTC30B

0.68

Hu IL 2 38

0.36

  

TTC4

0.81

Hu IL 4 52

0.67

  

UNQ6126

-0.79

Hu IL 5 33

0.23

  

ZNF677

0.86

Hu IL 6 19

-0.04

    

Hu IL 7 74

0.44

    

Hu IL 8 54

-0.69

    

Hu IL 9 77

0.13

    

Hu IP 10 48

0.73

    

Hu MCP 1 MCAF 53

-0.09

    

Hu MIP 1a 55

-0.24

    

Hu MIP 1b 18.

0.26

    

Hu PDGF bb 47

0.3

    

Hu RANTES 37

0.84

    

Hu VEGF 45

0.69

    

IFN a2 20

-0.29

    

Il 12 p40 28

0.59

    

Il 16 27

0.35

    

Il 18 42

0.4

    

Il 1a 63

0.04

    

Il 2Ra 13

0.57

    

Il 3 64

0.18

    

LIF 29

-0.04

    

M CSF 67

0.24

    

MCP 3 26

0.19

    

MIF 35

-0.48

    

MIG 14

0.24

    

SCF 65

-0.11

    

SCGF b 78

0.65

    

SDF 1a 22

0.39

    

TNF b 30

-0.19

    

TRAIL 66

0.38