Skip to main content

Table 2 The second set of weights of the epigenomic, transcriptomic and proteomic variables extracted by msPLS from the Marfan data

From: Multiset sparse partial least squares path modeling for high dimensional omics data analysis

Methylation markersGene expression markersCytokine markers
SitewGene codewMarker codew
cg230541890.93AGTR2-0.59b NGF 460.57
cg183476420.93C2orf430.87CTACK 720.52
cg164896100.85CCDC1120.87GRO a 610.16
cg270136960.91DKFZP434-0.58HGF 62-0.08
cg204577960.93GMCL10.88Hu Eotaxin 430.12
cg031815820.91LPO-0.77Hu FGF basic 440.23
cg105218510.9MAD2L10.74Hu G.CSF 57-0.57
cg199688400.92MGC4473-0.81Hu GM CSF 34-0.03
cg276480750.92NFAM1-0.7Hu IFN g 21-0.03
cg228915000.92NMI0.8Hu Il 10 560.17
cg051581970.92PF4-0.83Hu IL 12 p70 750.43
cg201191060.93PRDM14-0.71Hu IL 13 510.26
cg026753530.91PSMA8-0.63Hu IL 15 730.67
cg269910250.93RDM10.47Hu IL 17 76-0.14
cg206430120.92RNF80.69Hu IL 1b 39-0.03
  TTC30A0.8Hu IL 1ra 25-0.03
  TTC30B0.68Hu IL 2 380.36
  TTC40.81Hu IL 4 520.67
  UNQ6126-0.79Hu IL 5 330.23
  ZNF6770.86Hu IL 6 19-0.04
    Hu IL 7 740.44
    Hu IL 8 54-0.69
    Hu IL 9 770.13
    Hu IP 10 480.73
    Hu MCP 1 MCAF 53-0.09
    Hu MIP 1a 55-0.24
    Hu MIP 1b 18.0.26
    Hu PDGF bb 470.3
    Hu RANTES 370.84
    Hu VEGF 450.69
    IFN a2 20-0.29
    Il 12 p40 280.59
    Il 16 270.35
    Il 18 420.4
    Il 1a 630.04
    Il 2Ra 130.57
    Il 3 640.18
    LIF 29-0.04
    M CSF 670.24
    MCP 3 260.19
    MIF 35-0.48
    MIG 140.24
    SCF 65-0.11
    SCGF b 780.65
    SDF 1a 220.39
    TNF b 30-0.19
    TRAIL 660.38
\