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Table 3 Data collection summary

From: Identifying gene-specific subgroups: an alternative to biclustering

 

Name

Chip

Genes

Samples

Organism

Tissue/Condition

1

armstrong-v1

Affy

1081

72

Human

Blood

2

armstrong-v2

Affy

2194

72

Human

Blood

3

bhattacharjee

Affy

1543

203

Human

Lung

4

chowdary

Affy

182

104

Human

Breast, Colon

5

dyrskjot

Affy

1203

40

Human

Bladder

6

gordon

Affy

1626

181

Human

Lung

7

laiho

Affy

2202

37

Human

Colon

8

nutt-v1

Affy

1377

50

Human

Brain

9

nutt-v2

Affy

1070

28

Human

Brain

10

nutt-v3

Affy

1152

22

Human

Brain

11

pomeroy-v1

Affy

857

34

Human

Brain

12

pomeroy-v2

Affy

1379

42

Human

Brain

13

ramaswamy

Affy

1363

190

Human

Multi-tissue

14

shipp

Affy

798

77

Human

Blood

15

singh

Affy

339

102

Human

Prostate

16

su

Affy

1571

174

Human

Multi-tissue

17

west

Affy

1198

49

Human

Breast

18

yeoh-v1

Affy

2526

248

Human

Bone marrow

19

alpha factor

cDNA

1099

18

Yeast

Cell cycle synchronisation

20

cdc 15

cDNA

1086

24

Yeast

Cell cycle synchronisation

21

cdc 28

cDNA

1044

17

Yeast

Cell cycle synchronisation

22

elutriation

cDNA

935

14

Yeast

Cell cycle synchronisation

23

1mM menadione

cDNA

1050

9

Yeast

Environmental modifications

24

1M sorbitol

cDNA

1030

7

Yeast

Environmental modifications

25

15mM diamide

cDNA

1038

8

Yeast

Environmental modifications

26

25mM DTT

cDNA

991

8

Yeast

Environmental modifications

27

constant 32nM H2O2

cDNA

976

10

Yeast

Environmental modifications

28

diauxic shift

cDNA

1016

7

Yeast

Environmental modifications

29

complete DTT

cDNA

962

7

Yeast

Environmental modifications

30

heat shock 1

cDNA

988

8

Yeast

Environmental modifications

31

heat shock 2

cDNA

999

7

Yeast

Environmental modifications

32

nitrogen depletion

cDNA

1011

10

Yeast

Environmental modifications

33

YPD 1

cDNA

1011

12

Yeast

Environmental modifications

34

YPD 2

cDNA

1022

10

Yeast

Environmental modifications

35

Yeast sporulation

cDNA

1006

7

Yeast

Sporulation