Table 3 Performances of iProDNA-CapsNet on the test dataset (PDNA-TEST) under various decision thresholds
From: iProDNA-CapsNet: identifying protein-DNA binding residues using capsule neural networks
Setting | ACC (%) | SN (%) | SP (%) | PR (%) | MCC | AUC |
|---|---|---|---|---|---|---|
Threshold = 0.5 | 75.72 | 74.79 | 75.77 | 13.59 | 0.245 | 0.833 |
FPR ≈ 5% | 92.38 | 42.17 | 94.93 | 29.78 | 0.315 | 0.833 |
FPR ≈ 8% | 91.13 | 45.73 | 93.45 | 26.23 | 0.302 | 0.833 |
FPR ≈ 15% | 84.05 | 65.38 | 85.00 | 18.17 | 0.285 | 0.833 |
SP ≈ SN | 75.34 | 75.36 | 75.34 | 13.47 | 0.245 | 0.833 |