Table 2 Description of hub tables that were evaluated
From: Improving the organization and interactivity of metabolic pathfinding with precomputed pathways
Hub Table | Description |
|---|---|
20 (O) | Selected twenty hub compounds involved as reactants in the most number of reactions (highest out-degree). Subset of the 50 (O) hub table. |
50 (O) | Selected fifty hub compounds involved as reactants in the most number of reactions (highest out-degree). Subset of the 80 (O) hub table. |
80 (O) | Selected eighty hub compounds involved as reactants in the most number of reactions (highest out-degree). |
139 (A) | 139 hubs used in the Araki et al. [43] study. |
50 (IO) | Selected fifty hub compounds involved in the most number of reactions (either as reactants or products, highest degree). |
50 (I) | Selected fifty hub compounds involved as products in the most number of reactions (highest in-degree). |
50 (R1) and (R2) | Two independent sets of fifty randomly selected hub compounds. |