Table 1 DUGMO results for two B. subtilis genomes (i.e., Data1, Data2) and three E. coli genomes
Machine Learning | |||||||
|---|---|---|---|---|---|---|---|
Learning data | Prediction data | DUGMO final results | |||||
Number of host genome CDSs (1) | Number of known GMO CDSs (2) | Number of potential GM CDSs (1) | True positives (3) | False positives (3) | Max false negatives (3) (4) | True negatives (3) | |
GM B. subtilis (Data1) | 4102 | 2714 | 39 | 25 | 0 | 12 | 2 |
Wild type B. subtilis (Data2) | 3941 | 2724 | 4 | – | 0 | – | 0 |
E. coli with genes of A. tumefaciens | 4033 | 2588 | 6 | 5 | 0 | 0 | 1 |
E. coli with genes of M. tuberculosis | 4018 | 2589 | 5 | 4 | 0 | 0 | 1 |
E. coli with genes of S. pyogenes | 4015 | 2587 | 6 | 5 | 1 | 0 | 0 |