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Table 1 Human transcriptome datasets selected for benchmarking

From: Extending rnaSPAdes functionality for hybrid transcriptome assembly

Dataset Technology # of reads Strand-specific Accession No
Human siNT_48 Illumina 117 M RF SRP126849
  Iso-seq 5.6 M SRP126849
Human MCF7 Illumina 84 M No SRX426377
  Iso-seq 1.8 M
  Iso-seq FL 0.5 M
Human GM12878 Illumina 54 M No SRR3103887
  Nanopores 10 M