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Table 3 Average test accuracy in five-fold cross validation of the proposed model and state-of-the-art methods on cross-sentence n-ary relation extraction. “-” denotes that the value is not provided herein. Full Parametrization (FULL) denote as each edge label is associated with a 2D weight matrix to be tuned in training. Type Embedding (EMBED) denote as each edge label to an embedding vector. K in the GCN models means that the preprocessed pruned trees include tokens up to distance K away from the dependency path in the lowest common ancestor subtree. *: significant at p<0.005

From: Incorporating representation learning and multihead attention to improve biomedical cross-sentence n-ary relation extraction

Method

Ternary

Binary

 

Single

Cross

Single

Cross

Feature-based [31]

74.7

77.7

73.9

75.2

LSTM-CNN [13]

79.6

82.9

85.8

88.5

Graph LSTM-EMBED [5]

76.5

80.6

74.3

76.5

Graph LSTM-FULL [5]

77.9

80.7

75.6

76.7

Graph LSTM MULTITASK [5]

-

82.0

-

78.5

GS GLSTM [12]

82.3

85.5

85.4

85.6

GCN (K=0) [15]

85.6

85.8

82.8

82.7

AGGCN [16]

87.1

87.0

85.2

85.6

Bi-LSTM

80.8

85.9

88.6

89.3

GNN

83.0

86.6

88.7

88.6

Multihead attention

81.5

87.1

89.7*

90.6*

With KG

87.3*

91.9*

-

-