Table 4 Number of DMRs and different percentages of genes when the tools are tuned to detect DMRs in the known genes
From: HPG-DHunter: an ultrafast, friendly tool for DMR detection and visualization
BSmooth | DSS-Single | methylKit | HPG-DHunter | |
|---|---|---|---|---|
A-Total DMRs | 10717 | 9022 | 51074 | 8595 |
B-DMRs in genes | 5515 | 4576 | 18177 | 3863 |
C-genes with DMRs | 1594 | 2245 | 2422 | 1886 |
%DMRs in Genes(B/A) | 51.46 | 50.72 | 35.59 | 44.94 |
%Genes in DMRs tota(C/A) | 14.87 | 24.88 | 4.74 | 21.94 |
%Genes in (DMRs in gen)(C/B) | 28.90 | 49.06 | 13.32 | 48.82 |