Table 11 Top 40 Genes selected by enetLTS for the TNBC dataset

Up-regulated

VGLL1(0.245), PPP1R14C(0.232), RGMA(0.213), CT83(0.207), EN1(0.184), UGT8(0.182), FOXC1(0.178), SMOC1(0.173), HORMAD1(0.17), SFT2D2(0.161), CA12(− 0.155), C19orf47(0.147), MSLN(0.138), PRSS16(0.129), RCOR2(0.12), FGD1(0.12), MIA(0.119), FAM171A1(0.116), KRT16(0.115), KRT23(0.111), KCNK5(0.109), COL9A3(0.097), TMSB15A(0.096)

Down-regulted

FOXA1(− 0.276), SPDEF(− 0.264), GPR160(− 0.197), GATA3(− 0.171), CA12(− 0.155), CAPN13(− 0.143), DNALI1(− 0.142), SLC40A1(− 0.135), AGR2(− 0.129), TFF3(− 0.121), RND1(− 0.118), PGAP3(− 0.11), SNCG(− 0.11)HSPB8(− 0.108), SLC44A4(− 0.1), SIDT1(− 0.097), MMP19(− 0.094), AGR3(− 0.093)