Table 7 Top 20 outliers detected using Ensemble for the TNBC dataset*
ID | ER | PR | HER2 | HER2_level | HER2_status | HER2_FISH | y | qvalues |
|---|---|---|---|---|---|---|---|---|
TCGA-E9-A1ND | 1.44 (−) | 0.05 (−) | 13.05 |  | + |  | non-TNBC | 8.90E-06 |
TCGA-AR-A1AJ | 1.47 (+) | 0.07 (−) | 9.74 |  | – |  | non-TNBC | 8.46E-06 |
TCGA-A2-A04U | 0.02 (−) | 0.02 (−) | 9.64 | 1+ | – | + | non-TNBC | 1.65E-05 |
TCGA-E9-A22G | 0.44 (−) | 0.02 (−) | 15.32 |  | + |  | non-TNBC | 2.76E-05 |
TCGA-OL-A97C | 16.25 (−) | 8.56 (−) | 24.04 |  |  | – | TNBC | 7.43E-05 |
TCGA-AC-A62X | 0.19 (+) | 0.02 (−) | 28.53 |  |  |  | non-TNBC | 4.24E-05 |
TCGA-A7-A13D | 0.52 (−) | 0.81 (+) | 42.28 | 2+ | Equiv | – | non-TNBC | 6.89E-05 |
TCGA-BH-A42U | 9.19 (−) | 1.83 (−) | 38.37 |  | – |  | TNBC | 7.16E-05 |
TCGA-OL-A5S0 | 0.09 (+) | 0.06 (−) | 31.92 |  |  | + | non-TNBC | 7.07E-05 |
TCGA-E2-A1II | 0.14 (−) | 0.19 (+) | 10.73 | 1+ | – |  | non-TNBC | 1.50E-04 |
TCGA-A2-A0EQ | 2.13 (−) | 0.04 (−) | 30.15 | 3+ | + | – | TNBC | 1.62E-04 |
TCGA-B6-A0IJ | 1.18 (+) | 0.46 (+) | 11.12 | Â | Â | Â | non-TNBC | 1.55E-04 |
TCGA-C8-A26Y | 0.12 (−) | 0.05 (−) | 22.92 | 1+ | – |  | TNBC | 1.53E-04 |
TCGA-A2-A1G6 | 23.90 (−) | 21.45 (−) | 29.74 | 1+ | – |  | TNBC | 2.24E-04 |
TCGA-BH-A5IZ | 5.12 (+) | 0.03 (−) | 28.08 |  | – | – | non-TNBC | 2.18E-04 |
TCGA-A2-A0YJ | 0.09 (+) | 0.03 (−) | 240.24 | 0 | – |  | non-TNBC | 3.42E-04 |
TCGA-AR-A1AH | 0.03 (+) | 0.03 (−) | 34.12 |  | – |  | non-TNBC | 2.68E-04 |
TCGA-BH-A0DL | 6.99 (+) | 0.04 (−) | 9.92 |  | – |  | non-TNBC | 3.23E-04 |
TCGA-E9-A1NC | 0.11 (−) | 0.07 (+) | 15.91 |  | + |  | non-TNBC | 2.76E-04 |
TCGA-AO-A03U | 0.56 (−) | 0.12 (−) | 17.06 | 0 | – | – | TNBC | 2.97E-04 |