Fig. 6

Packing process of 400 macromolecules with 20 types. Subfigure (a) and (c) shows wireframe view multiple-ball view of the packing process, respectively. In subfigure (a), each fully-linked body represents a macromolecule. The chemical bonds belong to the same macromolecule are marked in the same color. In subfigure (c), each macromolecule is represented by a cluster of balls in the same color. The macromolecules are initialized randomly in the scene, and they are far from each other. After packing, all macromolecules are brought together to form a tight cluster. Subfigure (b) is the 3D visualization of final PDB file, 20 types of macromolecules are marked in different colors. Subfigure (d) is a slice in this simulated volume