Fig. 3
From: Evaluation of variant calling tools for large plant genome re-sequencing
Venn diagrams for variant calling tool comparison. SNP variants were called using different variant calling tools and filtered through the same stringent filtering criteria. The numbers of overlap and unique SNP loci were displayed. a. Samtools/mpileup compared with FreeBayes, GATK, and Platypus. b Samtools/mpileup compared with SNVer, VarDict, and VarScan