Table 2 This table shows the features of three datasets that were generated using most recent version of PASTIS for evaluating performance for protein based applications
From: ADEPT: a domain independent sequence alignment strategy for gpu architectures
Dataset | Query Set | Reference Set | Total Alignments | ||
|---|---|---|---|---|---|
| Â | Min. Size | Max. Size | Min. Size | Max. Size | Â |
Protein-1 | 20 | 200 | 200 | 1,664 | 31,846,093 |
Protein-2 | 20 | 400 | 400 | 1,664 | 38,610,219 |
Protein-3 | 20 | 600 | 600 | 1,664 | 12,148,680 |