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Table 3 Edge correctness score and sequence similarity score (mean values) for 45 pairs of virus-host protein-protein interaction networks from the STRING Viruses database, for the integer linear programming formulation with λ=0.5 and different sequence similarity measures [12]

From: Alignment of biological networks by integer linear programming: virus-host protein-protein interaction networks

Sequence Edge Sequence
Similarity Correctness Similarity
1-mer 0.8540 0.8831
2-mer 0.8572 0.7229
3-mer 0.8581 0.5928
4-mer 0.8585 0.5619
Alignment 0.8465 0.3194