Table 1 Experimental results of predicting GO annotations of Maize and Human genome

BP

DeepGOA

82.44

89.56

70.18

0.9965

67.53

55.20

69.79

62.20

19.7772

38.52

DeepGOPlus

76.47

89.52

69.64

1.2193

59.61

53.61

68.74

60.75

20.0152

36.23

DeepGO

64.41

85.39

62.91

1.2586

59.49

50.25

63.85

57.13

20.6061

32.71

Deepred

67.39

84.95

63.02

1.3509

58.21

55.60

68.33

56.96

19.9538

38.07

BLAST

32.61

71.77

28.96

1.1745

61.10

46.50

57.72

48.94

20.2695

33.92

Navie

27.08

49.93

27.67

1.8957

29.32

51.94

49.98

56.61

20.4729

34.45

CC

DeepGOA

96.33

87.73

75.78

0.6603

75.74

50.88

75.69

49.97

4.9029

62.92

DeepGOPlus

91.21

82.51

77.84

0.8105

70.82

50.18

65.15

48.70

4.9488

62.75

DeepGO

86.57

82.91

72.07

0.7759

71.08

43.60

69.51

44.81

5.1828

58.86

Deepred

84.77

86.74

73.86

0.6952

69.85

44.58

75.94

44.58

5.8166

61.77

BLAST

39.48

70.82

39.18

0.7904

62.02

21.25

56.27

26.91

5.0593

44.18

Navie

48.14

49.98

43.74

1.2458

49.84

36.27

48.69

37.70

5.4474

55.15

MF

DeepGOA

83.63

92.51

68.63

1.7024

58.10

68.64

82.03

70.98

4.7571

47.71

DeepGOPlus

72.70

83.67

64.42

1.6777

51.25

67.84

81.86

69.38

4.8426

46.82

DeepGO

68.78

88.22

59.91

1.8551

52.82

54.56

75.98

62.47

5.2581

40.43

Deepred

62.89

89.73

57.65

2.287

45.49

62.68

81.30

62.01

5.1711

45.14

BLAST

27.40

67.76

32.92

1.8274

51.40

42.33

62.34

46.11

4.9195

41.07

Navie

28.44

51.04

28.84

2.7430

26.13

46.86

49.87

52.77

5.7466

32.59