Skip to main content
Fig. 3 | BMC Bioinformatics

Fig. 3

From: PALMER: improving pathway annotation based on the biomedical literature mining with a constrained latent block model

Fig. 3

Reconstruction of known pathways. The heatmap shows the binary matrix, where a black cell indicates value of one. The color bars on the left show the true [left: “Gene (true)”] and the predicted gene clusters [right: “Gene (pred.)”], respectively. In the color bar “Gene (true)”, values 1 (red) and 2 (green) indicate the mTOR signaling pathway genes and the NOTCH signaling pathway genes. The color bar on the top indicates the predicted GO term clusters [“GO (pred.)”]

Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us