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Table 5 F-measure values (as in (8)) for each cell type for \({\mathcal {C}}^{17}\) and \({\mathcal {C}}^{27}\) which are used to obtain the respective median F-measure value in Table 4

From: optimalFlow: optimal transport approach to flow cytometry gating and population matching

  \({\mathcal {C}}^{17}\) \({\mathcal {C}}^{27}\)
F-measure Precision Recall F-measure Precision Recall
Abnormal Sig Kappa     0.9697 0.9478 0.9925
CD4+CD8\({-}\) 0.9973 0.9982 0.9965 0.9828 0.9796 0.9859
CD8+CD4\({-}\) 0.9960 0.9960 0.9960 0.9769 0.9835 0.9704
Neutrophils 0.9968 0.9959 0.9978 0.9421 0.9092 0.9775
Debris/Doublets 0.9692 0.9818 0.9570 0.7704 0.9111 0.6673
Monocytes 0.9679 0.9571 0.9791 0.8419 0.8475 0.8364
Mature Sig Lambda 0.9897 0.9939 0.9856 0.9561 0.9864 0.9277
Mature Sig Kappa 0.9923 0.9866 0.9981 0.9421 0.9421 0.9421
TCRgd\({-}\) 0.9810 0.9777 0.9843 0.5549 0.5698 0.5408
TCRgd\({-}\) 0.9403 0.9145 0.9677 0.8634 0.8195 0.9122
CD4+CD8dim 0.9452 0.9504 0.9401 0.5899 0.7111 0.5039
NK cells     0.9313 0.9433 0.9196
Myeloid Cells     0.8321 0.9489 0.7409
CD56dim 0.9827 0.9683 0.9975    
Eosinophils 0.9722 0.9713 0.9732    
Monocytoid DC 0.9563 0.9713 0.9417    
Basophils 0.9123 0.9877 0.8476    
Neutrophils (U.S.) 0.7632 0.7106 0.8242    
Myeloid DC 0.8908 0.8413 0.9464    
CD56bright 0.8785 0.9860 0.7921    
Plasmocytoid DC 0.7790 0.8011 0.7581    
Plasma Cells 0.9677 1.0000 0.9375    
  1. Recall and precision are defined in (9)