Table 1 Bioinformatic workflow numbers
From: Identification of novel alternative splicing biomarkers for breast cancer with LC/MS/MS and RNA-Seq
| Â | Count |
|---|---|
Average number of RNA-Seq reads per sample | 29,012,741 |
Junction with 6+ reads | 186,784 |
Annotated junctions | 175,225 |
Alternative splicing biomarkers from RNA-Seq (0.05 q-value) | 256 |
Peptides 1% FDR and 0.1 E-value | 79 |
Alternative splicing peptides from proteome | 26 |