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Table 2 Average AUC values of SEPT and SEP by training on the six cell lines data and test on one other cell line data in running 10 times

From: Prediction of enhancer–promoter interactions using the cross-cell type information and domain adversarial neural network

Test cell line Cell line(s) of source domain Model AUC
GM12878 HMEC, HUVEC, HeLa-S3, IMR90, K562, NHEK SEP 0.65
SEPT 0.72
HMEC GM12878, HUVEC, HeLa-S3, IMR90, K562, NHEK SEP 0.68
SEPT 0.76
HUVEC GM12878, HMEC, HeLa-S3, IMR90, K562, NHEK SEP 0.69
SEPT 0.78
HeLa-S3 GM12878, HMEC, HUVEC, IMR90, K562, NHEK SEP 0.69
SEPT 0.77
IMR90 GM12878, HMEC, HUVEC, HeLa-S3, K562, NHEK SEP 0.72
SEPT 0.78
K562 GM12878, HMEC, HUVEC, HeLa-S3, IMR90, NHEK SEP 0.65
SEPT 0.73
NHEK GM12878, HMEC, HUVEC, HeLa-S3, IMR90, K562 SEP 0.69
SEPT 0.76