From: Genome-wide detection of short tandem repeat expansions by long-read sequencing
Subject | True counts | Prior knowledge | RepeatHMM-DB | |||
---|---|---|---|---|---|---|
Allele | Subject | Score | Allele | Subject | ||
SRR5363334 | 14, 77 | N, P | P | − 2.2, 8.4 | N, P | P |
SRR5363452 | 30, 66 | N, P | P | 0.5, 6.6 | N, P | P |
SRR5363453 | 14, 69 | N, P | P | − 2.2, 7.1 | N, P | P |
SRR5363454 | 14, 71 | N, P | P | − 2.2, 7.4 | N, P | P |
SRR5363455 | 21, 72 | N, P | P | − 1.0, 7.6 | N, P | P |
SRR5363456 | 14, 77 | N, P | P | − 2.2, 8.4 | N, P | P |
SRR5363457 | 26, 71 | N, P | P | − 0.2, 7.4 | N, P | P |
SRR5363458 | 14, 63 | N, P | P | − 2.2, 6.1 | N, P | P |
SRR5363459 | 29, 70 | N, P | P | 0.3, 7.2 | N, P | P |
SRR5363460 | 27, 71 | N, P | P | 0.0, 7.4 | N, P | P |
SRR5363461 | 34, 75 | N, P | P | 1.2, 8.1 | N, P | P |
SRR5363462 | 28, 89 | N, P | P | 0.2, 10.4 | N, P | P |
SRR5363463 | 61, 61 | P, P | P | 5.7, 5.7 | P, P | P |
SRR5363464 | 26, 65 | N, P | P | − 0.2, 6.4 | N, P | P |
SRR5363465 | 14, 89 | N, P | P | − 2.2, 10.4 | N, P | P |
SRR5363466 | 40, 67 | P, P | P | 2.2, 6.7 | P, P | P |
SRR5363467 | 37, 68 | N, P | P | 1.7, 6.9 | N, P | P |
SRR5363468 | 28, 40 | N, P | P | 0.2, 2.2 | N, P | P |
SRR5363469 | 14, 82 | N, P | P | − 2.2, 9.2 | N, P | P |
SRR5363470 | 14, 68 | N, P | P | − 2.2, 6.9 | N, P | P |
SRR5363471 | 14, 14 | N, N | N | − 2.2, − 2.2 | N, N | N |
SRR5363472 | 27, 35 | N, N | N | 0.0, 1.3 | N, N | N |
SRR5363473 | 28, 28 | N, N | N | 0.2, 0.2 | N, N | N |
SRR5363480 | 14, 14 | N, N | N | − 2.2, − 2.2 | N, N | N |
SRR5363632 | 14, 19 | N, N | N | − 2.2, − 1.3 | N, N | N |