Fig. 2
From: LDscaff: LD-based scaffolding of de novo genome assemblies
LDscaff performance in simulated data. a The heatmap for the LD ma-trix in the simulated experiment with 40 vertices in 20 scaffolds, pixel intensity in the matrix indicates the strength of LD. Solid lines represent correct scaffolding orders, while dash lines represent misassembly; b The error rates versus gap sizes; c The error rates and numbers of matching links using different cutoff thresholds