Table 3 Average percentage of standardized peaks overlapping
From: WACS: improving ChIP-seq peak calling by optimally weighting controls
WACS | WACS Random10 | Matched MACS2 | All MACS2 | AIControl | |
|---|---|---|---|---|---|
WACS | – | 42.0 | 37.7 | 39.6 | 25.1 |
WACS Random10 | 42.0 | – | 39.5 | 42.7 | 25.0 |
Matched MACS2 | 37.7 | 39.4 | – | 41.7 | 23.5 |
All MACS2 | 39.6 | 42.7 | 41.2 | – | 24.3 |
AIControl | 25.1 | 25.0 | 23.5 | 24.3 | – |