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Table 3 Methods Comparison in Regression Tasks

From: Dynamic incorporation of prior knowledge from multiple domains in biomarker discovery

MethodLassoRRFKnow-GRRF
Prior 1Prior 2Prior 3
Freq>50%StepwiseFreq>50%StepwiseFreq>50%Stepwise
Scenario 1
JI0.91a0.070.280.540.330.540.560.48
TPR1.000.200.700.700.700.701.001.00
FPR0.010.220.170.030.120.030.090.12
FN2, 3, 4, 5, 6, 9, 106, 7, 106, 7, 102, 3, 42, 3, 4
Scenario 2
JI0.090.110.250.280.260.470.63a0.53
TPR0.100.300.700.500.600.801.001.00
FPR0.010.190.200.090.140.080.070.10
FN2, 3, 4, 5, 6, 7, 8, 9, 101, 2, 3, 4, 7, 8, 96, 8, 94, 6, 7, 8, 91, 2, 3, 43, 4
Scenario 3
JI0.670.190.290.570.260.470.560.67a
TPR1.000.500.700.800.600.801.001.00
FPR0.060.180.160.040.140.080.090.06
FN1, 3, 5, 7, 87, 8, 107, 81, 2, 3, 51, 3
  1. aindicates the best JI value in each scenario