From: Detection of suspicious interactions of spiking covariates in methylation data
E-GEOD | Richter † | ||||
---|---|---|---|---|---|
32,861 | 54,643 | 55,454 | 68,825 | ||
Samples | 118 | 20 | 38 | 113 | 75 |
CpG sites | 26,300 | 485,512 | 26,397 | 449,042 | 802,271 |
SPY | 25.31±32.48 | 17.15±6.57 | 49.85±24.84 | 51.54±31.46 | 4.33±8.62 |
[0; 120] | [7; 27.7] | [13; 156] | [8; 192] | [0; 47] | |
Spike at ‡ | 0 | 20 | 60 | 50 | 0 |
Spike samples | 62 | 6 | 7 | 49 | 45 |
Linear samples | 56 | 14 | 31 | 64 | 30 |
† Richter et al. (2019)[17], ‡ according to publication |