Detection of suspicious interactions of spiking covariates in methylation data

BMC Bioinformatics

Table 4 Summary table of the ArrayExpress data and the data from Richter et al. (2019) [17]

	E-GEOD				Richter ^†
	32,861	54,643	55,454	68,825
Samples	118	20	38	113	75
CpG sites	26,300	485,512	26,397	449,042	802,271
SPY	25.31±32.48	17.15±6.57	49.85±24.84	51.54±31.46	4.33±8.62
	[0; 120]	[7; 27.7]	[13; 156]	[8; 192]	[0; 47]
Spike at ^‡	0	20	60	50	0
Spike samples	62	6	7	49	45
Linear samples	56	14	31	64	30
^† Richter et al. (2019)[17], ^‡ according to publication

ISSN: 1471-2105