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Table 1 Evaluations of our method MASS with four top-performing single-model methods in stage 2 for 75 targets of CASP 11 (groups are ranked by wmPMCC and best results are highlighted in bold)

From: MASS: predict the global qualities of individual protein models using random forests and novel statistical potentials

Group ID

wmPMCC

Ave loss

Ave ΔGDT

MCC

ROC

MASS

0.409

0.07029

0.00076

0.60

0.88

QAcon

0.390

0.07543

0.00064

0.61

0.88

Qprob

0.368

0.07540

0.00113

0.52

0.86

ProQ2-refine

0.351

0.07068

0.00083

0.58

0.86

ProQ2

0.349

0.06191

0.00085

0.57

0.85

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BMC Bioinformatics

ISSN: 1471-2105

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